rs7413749 chr1:191898950 A>C
- Sequence
ttaagtctacactagcatgtggac[A/C]cagcatcataatcagctgattatt
- ASB in cell types
- LNCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 1.39 | -0.56 | 1.50 | -1.22 | Weak Concordant |
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Motif analysis
Genetic associations
GRASP 2 hour glucose, diabetic retinopathy in type 2 diabetes mellitus, variant creutzfeldt-jakob disease