rs7414246 chr1:67695058 C>G

Sequence
aactataggaagctgacagacaca[C/G]ataattttcaagccagagtggtgt
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
ARI1B_HUMAN IKZF1_HUMAN MTG16_HUMAN MNT_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ARI1B_HUMAN n/a 1.93 1.008.6·10-7 2.00 n/a n/a
IKZF1_HUMAN -0.54 3.51 0.995.8·10-5 2.00 n/a n/a
MTG16_HUMAN n/a 2.75 1.005.8·10-5 2.00 n/a n/a
MNT_HUMAN -0.11 2.98 1.001.3·10-4 2.00 n/a No Hit
REQU_HUMAN -4.70 2.59 1.003.2·10-4 2.00 n/a n/a
Items per page:
1 – 5 of 17

Motif analysis

TAL1_HUMAN Concordant
TAL1_HUMAN pic

Genetic associations

GRASP 2 hour glucose advanced age-related macular degeneration advanced age-related macular degeneration (choroidal neovascularization) vs. no amd

Download