rs7416590 chr1:157878241 G>A
- Sequence
tgttcacagagcttctttcttaac[G/A]agtgccaccagatgtcactcttct
- ASB in cell types
- foreskin keratinocyte THP-1 (acute monocytic leukemia)
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.76 | 0.89 | 1.56 | -0.95 | Weak Discordant | |||
| RAD21_HUMAN | 0.27 | 1.02 | 1.86 | n/a | n/a |
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Motif analysis
