rs741899 chr8:133453484 C>G
- Sequence
gagctggcctggaaaagcgggcgg[C/G]ggggccgactgcagcatagcacca
- ASB in cell types
- K562 (myelogenous leukemia) SK-N-AS (neuroblastoma) HepG2 (hepatoblastoma) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN VEZF1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.98 | 0.43 | 1.44 | n/a | No Hit | |||
| RAD21_HUMAN | 1.17 | 0.29 | 1.58 | n/a | n/a | |||
| VEZF1_HUMAN | n/a | 3.69 | 2.00 | 3.30 | Concordant |
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Motif analysis
