rs7422 chr14:89417678 A>C

Sequence
aaagtaaaaataaaaagaattacg[A/C]tgcgggcgaggcttgtgggggtga
ASB in cell types
MS-1 (Small cell lung carcinoma)
ASB for transcription factors
STAG1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAG1_HUMAN 1.95 0.13 4.0·10-31.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP birth weight,  childhood acute lymphoblastic leukemia,  college completion,  waist hip ratio,  years of education
GTEx eQTL Artery_Aorta,  Artery_Tibial,  Esophagus_Muscularis,  Heart_Left_Ventricle,  Lung,  Muscle_Skeletal,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg

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