rs742361 chr1:15400070 G>A

Sequence
attcacccttggtacctttgtctt[G/A]tctcctttctcactcctggagctc
ASB for transcription factors
TIF1A_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TIF1A_HUMAN 2.33 -2.17 0.051.00 1.00 n/a n/a
Items per page:
1 – 1 of 1

Motif analysis

No data available

Genetic associations

GRASP cystatin c in serum,  fasting insulin,  homa-b,  homa-ir,  irritible bowel syndrome,  systolic blood pressure (sbp),  total cholesterol
GTEx eQTL Adipose_Visceral_Omentum,  Artery_Aorta,  Artery_Tibial,  Breast_Mammary_Tissue,  Thyroid

Download