rs742375 chr1:209658199 C>T

Sequence
tgcccacagcgcctgtggctacac[C/T]ggggtatgtgtatggacttgaccg
ASB in cell types
MCF10A (breast epithelial cells) keratinocytes
ASB for transcription factors
SNAI2_HUMAN P63_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SNAI2_HUMAN n/a 2.68 1.005.6·10-4 1.50 n/a No Hit
P63_HUMAN 1.84 0.41 0.010.72 1.62 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration,  diastolic blood pressure (dbp)
GTEx eQTL Cells_Cultured_fibroblasts,  Skin_Not_Sun_Exposed_Suprapubic

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