rs742993 chr20:51372431 A>G

Sequence
gagccccaggccctggatctgagc[A/G]tcctcagtggggcttggggatccg
ASB in cell types
K562 (myelogenous leukemia) A673 (Ewing sarcoma) esophagus squamous epithelium TTC-1240 (Rhabdoid tumor of the kidney)
ASB for transcription factors
IKZF2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF2_HUMAN 2.17 n/a 0.031.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Esophagus_Mucosa

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