rs743418 chr21:33976199 C>T
- Sequence
agttctccccagaggctgctgggt[C/T]cacctctccctctgccagacagac
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- HTF4_HUMAN ZNF24_HUMAN ZEB2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| HTF4_HUMAN | 1.91 | -0.38 | 1.00 | n/a | No Hit | |||
| ZNF24_HUMAN | 1.93 | 0.39 | 1.00 | n/a | No Hit | |||
| ZEB2_HUMAN | -1.61 | 1.93 | 1.00 | 0.50 | Weak Concordant |
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Motif analysis
Genetic associations
GTEx eQTL Esophagus_Mucosa, Esophagus_Muscularis, Muscle_Skeletal, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg