rs7437490 chr4:2402356 T>C

Sequence
ccgcccccgccatcagacaccatc[T/C]cccgccccgcccgctgcaggagca
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
NRF1_HUMAN HDAC1_HUMAN IKZF1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
NRF1_HUMAN 2.22 -0.87 7.5·10-31.00 2.00 n/a No Hit
HDAC1_HUMAN 2.02 -0.70 0.011.00 2.00 n/a n/a
IKZF1_HUMAN 2.56 -4.79 0.021.00 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Muscle_Skeletal Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg

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