rs74409869 chr15:31326456 G>A

Sequence
gccgctccgcgccgcgactacccg[G/A]cccgccgcccccggacgtcatgcg
ASB in cell types
MOLT-4 (Adult T acute lymphoblastic leukemia) HCT-116 (colon carcinoma)
ASB for transcription factors
TF7L1_HUMAN SPT5H_HUMAN EGR1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TF7L1_HUMAN 2.86 -2.56 3.0·10-41.00 1.00 n/a No Hit
SPT5H_HUMAN 1.50 -0.16 8.5·10-31.00 1.00 n/a n/a
EGR1_HUMAN 1.35 0.58 0.020.99 1.08 n/a No Hit
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Motif analysis

No data available

Genetic associations

No data available

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