rs744553 chr16:84449875 T>A

Sequence
acgttagtaagtaaacatcccacg[T/A]ggcactggcctctaaatctgcacc
ASB in cell types
22RV1 (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 3.17 n/a 2.2·10-31.00 2.00 2.69 Discordant
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Motif analysis

ANDR_HUMAN Discordant
ANDR_HUMAN pic

Genetic associations

GRASP advanced age-related macular degeneration (geographic atrophy),  college completion,  homa-b,  homa-ir,  mitral annular calcium,  years of education
GTEx eQTL Adipose_Subcutaneous,  Artery_Tibial,  Nerve_Tibial,  Pituitary,  Testis,  Thyroid

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