rs7459979 chr8:21874926 C>G
- Sequence
cccccaatagcaaccaagctgtac[C/G]ggagctgcaaggccacctggtggc
- ASB in cell types
- IMR-5 (Neuroblastoma) WA01 (H1, human embryonic stem cells) MOLM-13(acute monocytic leukemia(AML), Homo sapiens) GM02610 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN TIF1B_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.63 | 1.85 | 1.45 | n/a | No Hit | |||
| RAD21_HUMAN | n/a | 4.04 | 2.00 | n/a | n/a | |||
| TIF1B_HUMAN | 1.04 | 2.85 | 1.50 | n/a | n/a |
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