rs746124 chr11:34977199 G>A
- Sequence
gagctgttattcacctaaaattcc[G/A]tgatactttagtaataggataggt
- ASB in cell types
- HCASMC (Human coronary artery smooth muscle cells) HASM2 (Human airway smooth muscle 2)
- ASB for transcription factors
- TCF21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TCF21_HUMAN | n/a | 2.90 | 2.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP arthritis including non-rheumatoid, birth weight, height, ldl cholesterol, longstanding arthritis, paternal transmission distortion, total cholesterol
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Nerve_Tibial, Ovary, Pancreas, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid, Whole_Blood