rs7461857 chr8:29647470 G>A
- Sequence
ccccagcactgcagagtgagagac[G/A]cctatcagcagggggcagcattga
- ASB in cell types
- Peyer's patch upper lobe of left lung spleen LNCaP C4-2B (prostate carcinoma)
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN SMC1A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.68 | 2.30 | 1.63 | n/a | No Hit | |||
| RAD21_HUMAN | 0.24 | 1.51 | 1.53 | n/a | n/a | |||
| SMC1A_HUMAN | -0.44 | 1.73 | 1.25 | n/a | n/a |
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