rs748282 chr8:27459463 T>G

Sequence
gtgagccaagtcctggaagaaacc[T/G]attgtgttcatgttggacagagat
ASB in cell types
breast tumor 22RV1 (prostate carcinoma) Ishikawa (endometrial adenocarcinoma) HepG2 (hepatoblastoma)
ASB for transcription factors
ANDR_HUMAN MIXL1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN -0.29 2.97 1.002.4·10-4 2.00 n/a No Hit
MIXL1_HUMAN 2.63 -2.67 0.011.00 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP abnormal involuntary movement scale,  barnes akathisia rating scale,  college completion,  diastolic blood pressure (dbp),  waist hip ratio
GTEx eQTL Adrenal_Gland,  Artery_Tibial,  Esophagus_Mucosa,  Pancreas,  Testis,  Whole_Blood

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