rs750179 chr1:113276790 T>C
- Sequence
gctccttcacttcaaaggagaggt[T/C]cttggtcattttgataacagttga
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- KDM1A_HUMAN HDAC2_HUMAN MYBB_HUMAN SMCA4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| KDM1A_HUMAN | 3.03 | 0.50 | 1.12 | n/a | n/a | |||
| HDAC2_HUMAN | 3.55 | -3.24 | 1.00 | n/a | n/a | |||
| MYBB_HUMAN | 3.67 | n/a | 1.00 | n/a | No Hit | |||
| SMCA4_HUMAN | 2.98 | -1.21 | 1.00 | n/a | n/a | |||
| SOX6_HUMAN | 3.15 | -2.88 | 1.00 | n/a | No Hit |
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