rs7515306 chr1:37534584 G>A

Sequence
ttgctggcacgttgtttgtgtcac[G/A]tttagattccgattaaatgacatc
ASB in cell types
breast tumor MOLM14 (Adult acute myeloid leukemia)
ASB for transcription factors
PRGR_HUMAN HIF1A_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
PRGR_HUMAN -1.83 2.34 1.007.4·10-3 1.50 n/a No Hit
HIF1A_HUMAN 2.54 n/a 0.051.00 2.00 -3.04 Concordant
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Motif analysis

HIF1A_HUMAN Concordant
HIF1A_HUMAN pic

Genetic associations

GRASP cystatin c in serum,  urinary albumin-to-creatinine ratio
GTEx eQTL Adipose_Subcutaneous,  Artery_Aorta,  Artery_Tibial,  Brain_Cerebellum,  Breast_Mammary_Tissue,  Cells_Cultured_fibroblasts,  Colon_Transverse,  Esophagus_Muscularis,  Heart_Atrial_Appendage,  Muscle_Skeletal,  Nerve_Tibial,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Testis,  Thyroid,  Whole_Blood

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