rs7522909 chr1:9455990 A>G
- Sequence
cgagagtggggctgagtccctccc[A/G]ggagcccagcctgggtgtccccct
- ASB in cell types
- glioblastoma cells HuCCT1 (intrahepatic cholangiocarcinoma) WA09 (embryonic stem cells) GM02630 (Fanconi anemi)
- ASB for transcription factors
- SMC1A_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMC1A_HUMAN | 1.76 | 0.27 | 1.67 | n/a | n/a | |||
| STAG1_HUMAN | 0.50 | 0.56 | 1.00 | n/a | n/a |
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