rs754633 chr6:113627799 C>T
- Sequence
tctgctgacccaatacttaatacg[C/T]cataagattgaagacattctcttt
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- ATF2_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ATF2_HUMAN | 0.91 | 3.11 | 1.00 | 3.74 | Concordant | |||
| STAG1_HUMAN | 1.16 | -0.44 | 1.00 | n/a | n/a |
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Motif analysis
