rs7549012 chr1:147717139 A>G
- Sequence
gaagaacttcctgattgaaatctg[A/G]tcttgtaaggtacctggatgtgct
- ASB in cell types
- HepG2 (hepatoblastoma) ER+ breast tumor
- ASB for transcription factors
- NFIL3_HUMAN ELF3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NFIL3_HUMAN | 3.02 | n/a | 1.50 | n/a | No Hit | |||
| ELF3_HUMAN | 2.27 | -1.94 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP adiponectin levels, body mass index (bmi), diabetic retinopathy in type 2 diabetes mellitus, hdl cholesterol, ldl cholesterol
GTEx eQTL Adrenal_Gland, Artery_Tibial, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Muscle_Skeletal, Nerve_Tibial, Skin_Sun_Exposed_Lower_leg, Stomach, Thyroid