rs757152 chr7:108973235 T>C
- Sequence
aagggtgttttgaagttcaatcaa[T/C]gagacagatcactggagggagctc
- ASB in cell types
- pancreas HCT-116 (colon carcinoma) MS-1 (Small cell lung carcinoma) GM02630 (Fanconi anemi)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.70 | 1.22 | 1.24 | n/a | No Hit | |||
| STAG1_HUMAN | 1.44 | 1.63 | 1.00 | n/a | n/a | |||
| RAD21_HUMAN | 0.95 | 1.41 | 1.08 | n/a | n/a |
Items per page:
1 – 3 of 3