rs759191 chr16:4957707 C>T

Sequence
gtctccccaccgtagtataaactc[C/T]acgagggcagggattcgtgcgtgt
ASB in cell types
MS-1 (Small cell lung carcinoma) K562 (myelogenous leukemia) foreskin keratinocyte
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.40 2.02 1.001.9·10-7 1.33 n/a No Hit
Items per page:
1 – 1 of 1

Motif analysis

No data available

Genetic associations

GRASP body mass index (bmi) hdl cholesterol change with statins
GTEx eQTL Cells_Cultured_fibroblasts Heart_Atrial_Appendage Heart_Left_Ventricle Muscle_Skeletal Nerve_Tibial Stomach Thyroid Whole_Blood

Download