rs75987560 chr15:90648248 C>G
- Sequence
tcctcatgtggacactaggtggag[C/G]tgcaactataagagtggctcttag
- ASB in cell types
- THP-1 (acute monocytic leukemia) GM18526 (B – cells Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.34 | 0.27 | 1.00 | -1.54 | Weak Concordant | |||
| RAD21_HUMAN | 1.03 | 0.80 | 1.00 | n/a | n/a | |||
| STAG1_HUMAN | 0.69 | -0.69 | 1.00 | n/a | n/a |
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Motif analysis
