rs76031302 chr19:8390014 C>G
- Sequence
ttaagcatcgtagcattacctgga[C/G]gtagccccatttctcttcccggac
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) HepG2 (hepatoblastoma)
- ASB for transcription factors
- FOXK2_HUMAN ATF2_HUMAN JUND_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | 2.51 | -0.23 | 1.25 | n/a | No Hit | |||
| ATF2_HUMAN | 0.40 | -0.40 | 1.00 | n/a | No Hit | |||
| JUND_HUMAN | 2.28 | -1.76 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Brain_Caudate_basal_ganglia, Brain_Cerebellum, Brain_Putamen_basal_ganglia, Muscle_Skeletal, Thyroid