rs76056251 chr10:77711673 C>G
- Sequence
cccagatcacggaggcgcggagct[C/G]catctcctgccctgggcgagggga
- ASB in cell types
- KB (cervical adenocarcinoma) 2588 (Lymphoblastoid Cell Lines) E14 retina MDA-MB-231 (breast adenocarcinoma)
- ASB for transcription factors
- CTCF_HUMAN JUN_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.98 | 0.81 | 1.39 | -2.72 | Concordant | |||
| JUN_HUMAN | 1.37 | 0.05 | 2.00 | n/a | No Hit |
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Motif analysis
