rs76061830 chr4:125315785 C>A

Sequence
tgcgcgcagacgccgccgcctggg[C/A]ctcagcggccactgccggcgccct
ASB in cell types
HeLa (cervical adenocarcinoma)
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 1.26 -0.10 3.7·10-41.00 1.38 0.63 Weak Discordant
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Motif analysis

CTCF_HUMAN Weak Discordant
CTCF_HUMAN pic

Genetic associations

GTEx eQTL Muscle_Skeletal Nerve_Tibial

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