rs76066936 chr11:62841518 A>G

Sequence
gcgtcattcaacacactagcgata[A/G]aaacacctaatccaactcaaacaa
ASB in cell types
TTC-1240 (Rhabdoid tumor of the kidney) MDA-MB-468 (breast adenocarcinoma)
ASB for transcription factors
SMRC1_HUMAN ARID2_HUMAN STAT3_HUMAN SMCA4_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SMRC1_HUMAN 2.01 -0.87 2.9·10-51.00 1.00 n/a n/a
ARID2_HUMAN 2.06 n/a 9.7·10-51.00 2.00 n/a n/a
STAT3_HUMAN 2.94 -3.02 1.8·10-31.00 1.00 n/a No Hit
SMCA4_HUMAN 1.73 -0.43 0.021.00 1.17 n/a n/a
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Motif analysis

No data available

Genetic associations

No data available

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