rs76075303 chr16:79639916 T>C

Sequence
tatagcgtagaggctgagaaaccc[T/C]ggtttgcatgtttactttctgttt
ASB in cell types
foreskin keratinocyte breast tumor
ASB for transcription factors
CTCF_HUMAN FOXA1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 2.28 -3.94 3.3·10-41.00 2.33 n/a No Hit
FOXA1_HUMAN 1.94 0.54 0.021.00 1.57 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Subcutaneous,  Colon_Sigmoid,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg

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