rs76104618 chr16:22899008 G>A
- Sequence
tcacctccaactacccactagggg[G/A]cgctgctatgctgcaagaagtggg
- ASB in cell types
- GM17942 (lymphoblastoid cell) HCT-116 (colon carcinoma) HEK293 (embryonic kidney) bipolar neuron
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN STAG1_HUMAN SPI1_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.30 | 1.16 | 1.43 | -6.07 | Concordant | |||
| RAD21_HUMAN | 2.69 | 0.32 | 1.08 | n/a | n/a | |||
| STAG1_HUMAN | 1.84 | -1.58 | 1.00 | n/a | n/a | |||
| SPI1_HUMAN | 1.90 | -0.36 | 1.00 | n/a | No Hit |
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Motif analysis
