rs76117858 chr9:115495504 A>C
- Sequence
aaagatattgacttaacacacact[A/C]atctgttgacaggtaggtgaaata
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) MCF7 TamR (invasive ductal breast carcinoma Tamoxifen resistant) 22RV1 (prostate carcinoma) VCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN FOS_HUMAN ANDR_HUMAN GATA3_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 0.22 | 1.74 | 1.85 | n/a | No Hit | |||
| FOS_HUMAN | -3.93 | 2.54 | 1.50 | n/a | No Hit | |||
| ANDR_HUMAN | 3.11 | 1.67 | 2.67 | n/a | No Hit | |||
| GATA3_HUMAN | -0.46 | 1.39 | 2.08 | n/a | No Hit |
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