rs76153126 chr3:195895624 G>A
- Sequence
gccagccccgggctgacccccacc[G/A]agagccggggctctgccttcgccg
- ASB in cell types
- HCC1806(Squamous cell breast carcinoma, acantholytic variant)
- ASB for transcription factors
- BRD2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| BRD2_HUMAN | -1.66 | 1.61 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Esophagus_Mucosa, Esophagus_Muscularis, Lung, Pancreas, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Spleen, Thyroid, Whole_Blood