rs76187150 chr20:17504956 A>T
- Sequence
ttgttttgtcttaaaaaaaaaaaa[A/T]aggaaactcattacatactgtctt
- ASB in cell types
- GM19240 (B cells Lymphoblastoid Cell Lines) GM19099 (female B-cells Lymphoblastoid Cell Lines) GM18505 (female B-cells Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.85 | -0.69 | 1.31 | n/a | No Hit | |||
| STAG1_HUMAN | 0.50 | -0.80 | 1.27 | n/a | n/a |
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