rs76190581 chr17:7115124 C>T
- Sequence
ccagttctctactcttgcccaatc[C/T]ggcatctgaaccacagaccccagc
- ASB in cell types
- monocyte-derived macrophages from peripheral blood macrophages CD14+ monocytes
- ASB for transcription factors
- STAT3_HUMAN CEBPB_HUMAN STAT1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT3_HUMAN | 2.69 | n/a | 2.00 | n/a | No Hit | |||
| CEBPB_HUMAN | 1.02 | 0.01 | 1.67 | -0.05 | Weak Concordant | |||
| STAT1_HUMAN | 1.50 | -0.88 | 3.00 | n/a | No Hit |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Coronary, Artery_Tibial, Brain_Hypothalamus, Breast_Mammary_Tissue, Colon_Transverse, Esophagus_Mucosa, Lung, Nerve_Tibial, Pituitary, Small_Intestine_Terminal_Ileum, Spleen, Whole_Blood