rs76211352 chr19:12775664 G>A
- Sequence
acgcccgctcttgcctccagcccc[G/A]ccatcttggatccgggcaccgttc
- ASB in cell types
- monocytes from periferal blood 22RV1 (prostate carcinoma) breast tumor K562 (myelogenous leukemia)
- ASB for transcription factors
- SRBP2_HUMAN ANDR_HUMAN ESR1_HUMAN TADBP_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SRBP2_HUMAN | 3.48 | n/a | 3.00 | n/a | No Hit | |||
| ANDR_HUMAN | 3.15 | n/a | 2.00 | n/a | No Hit | |||
| ESR1_HUMAN | 2.56 | n/a | 2.00 | n/a | No Hit | |||
| TADBP_HUMAN | -0.44 | 2.33 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Tibial, Brain_Cerebellum, Brain_Cortex, Cells_Cultured_fibroblasts, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Whole_Blood