rs76240465 chr19:55385398 A>G
- Sequence
gattagccgagggattccgaatga[A/G]gacggagtatttccgaacatacac
- ASB in cell types
- K562 (myelogenous leukemia) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- ZSC29_HUMAN ANDR_HUMAN P66A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZSC29_HUMAN | 1.28 | n/a | 2.00 | n/a | No Hit | |||
| ANDR_HUMAN | 3.01 | n/a | 2.00 | n/a | No Hit | |||
| P66A_HUMAN | 2.82 | n/a | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Esophagus_Muscularis, Nerve_Tibial, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid