rs7626974 chr3:157477670 T>C

Sequence
aaacacaaagtagagagaatgact[T/C]atctaaatgacatcaagcctctgt
ASB in cell types
HEK293 (embryonic kidney)
ASB for transcription factors
ZN366_HUMAN TSH1_HUMAN PRD10_HUMAN SCRT2_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZN366_HUMAN n/a 3.45 1.001.6·10-10 1.50 n/a n/a
TSH1_HUMAN -3.90 3.58 1.002.0·10-5 1.00 n/a n/a
PRD10_HUMAN -2.88 3.24 1.002.8·10-5 1.00 n/a n/a
SCRT2_HUMAN -2.85 3.23 1.002.9·10-5 1.00 n/a No Hit
SP7_HUMAN -3.37 2.29 1.001.7·10-3 1.50 n/a No Hit
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Motif analysis

ZNF24_HUMAN Weak Discordant
ZNF24_HUMAN pic

Genetic associations

GRASP height
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Artery_Coronary,  Artery_Tibial,  Brain_Cerebellar_Hemisphere,  Brain_Cerebellum,  Breast_Mammary_Tissue,  Cells_Cultured_fibroblasts,  Heart_Atrial_Appendage,  Skin_Sun_Exposed_Lower_leg,  Whole_Blood

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