rs76272141 chr3:118595486 T>C
- Sequence
ctgctcaaacctctagggggagca[T/C]atagacaggcaggctgtggggctc
- ASB in cell types
- GM02255 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -1.78 | 2.06 | 1.00 | 1.24 | Weak Concordant | |||
| STAG1_HUMAN | -2.10 | 2.08 | 1.00 | n/a | n/a |
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Motif analysis
