rs76326669 chr1:220090119 T>G

Sequence
gcccacttcgtagagttcactgtt[T/G]taaaatgttctttgtattagtgat
ASB in cell types
22RV1 (prostate carcinoma) breast tumor
ASB for transcription factors
ANDR_HUMAN ESR1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 2.68 -4.96 1.0·10-31.00 2.00 1.97 Weak Discordant
ESR1_HUMAN 2.69 -5.02 8.1·10-31.00 2.00 n/a No Hit
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Motif analysis

ANDR_HUMAN Weak Discordant
ANDR_HUMAN pic

Genetic associations

GTEx eQTL Artery_Tibial,  Colon_Transverse,  Heart_Left_Ventricle,  Lung,  Muscle_Skeletal,  Nerve_Tibial,  Whole_Blood

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