rs76376323 chr1:230978719 C>G
- Sequence
tggccagggcgcctggccgcagcc[C/G]ggcggacaggacccccagcagcag
- ASB in cell types
- HEK293 (embryonic kidney) keratinocytes 22RV1 (prostate carcinoma) HL-60 (acute myeloid leukemia)
- ASB for transcription factors
- SNAI2_HUMAN ESR1_HUMAN ANDR_HUMAN BACH1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SNAI2_HUMAN | 2.33 | n/a | 3.00 | n/a | No Hit | |||
| ESR1_HUMAN | 2.60 | -0.69 | 2.00 | n/a | No Hit | |||
| ANDR_HUMAN | 2.05 | -1.18 | 2.00 | n/a | No Hit | |||
| BACH1_HUMAN | 2.41 | -2.01 | 1.00 | n/a | No Hit | |||
| INT11_HUMAN | 1.87 | -0.18 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Tibial, Brain_Cerebellum, Brain_Cortex, Esophagus_Muscularis, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid, Whole_Blood