rs76406709 chr6:36977617 G>A
- Sequence
gccagcttagatacagtctcgggg[G/A]aaggggggtggcttaccatgcagg
- ASB in cell types
- MCF7L-P(immortalized breast epithelial cell line) SK-N-SH (neuroblastoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.52 | 1.07 | 1.24 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Brain_Putamen_basal_ganglia, Brain_Spinal_cord_cervical_c-1, Cells_Cultured_fibroblasts, Pancreas