rs76421803 chr1:88684130 C>T
- Sequence
gacgccccgccccctcgccgcgtt[C/T]gccctagggaacccctccgcccca
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) adult erythroblasts
- ASB for transcription factors
- MEF2B_HUMAN COE1_HUMAN HCFC1_HUMAN CREB1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MEF2B_HUMAN | -1.33 | 1.33 | 1.00 | n/a | No Hit | |||
| COE1_HUMAN | -1.01 | 2.52 | 1.17 | 0.06 | Weak Concordant | |||
| HCFC1_HUMAN | 1.74 | n/a | 2.50 | n/a | n/a | |||
| CREB1_HUMAN | 0.20 | 1.55 | 1.33 | n/a | No Hit | |||
| RBBP5_HUMAN | 0.99 | n/a | 2.50 | n/a | n/a |
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Motif analysis
