rs76427858 chr2:24024371 C>A

Sequence
gacatccctgctgtgtcacacagt[C/A]ctgcctctgggacctctttcctta
ASB in cell types
A549 (lung carcinoma)
ASB for transcription factors
RAD21_HUMAN SMC3_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RAD21_HUMAN 0.25 1.13 0.927.4·10-3 1.04 n/a n/a
SMC3_HUMAN -0.08 1.09 1.000.02 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Artery_Aorta,  Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Lung,  Skin_Sun_Exposed_Lower_leg,  Thyroid

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