rs76428822 chr4:55270323 G>T

Sequence
gggtaagtcatcatcgtgagatgg[G/T]ttttcctctctccctgctgtggac
ASB in cell types
HUVEC-C (HUVEC, umbilical vein endothelial cells)
ASB for transcription factors
TF65_HUMAN NOTC1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TF65_HUMAN 2.26 -4.50 0.031.00 2.00 -2.57 Concordant
NOTC1_HUMAN 2.29 -1.22 0.041.00 2.00 n/a n/a
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Motif analysis

TF65_HUMAN Concordant
TF65_HUMAN pic

Genetic associations

GTEx eQTL Cells_Cultured_fibroblasts

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