rs76463589 chr4:76279664 C>A
- Sequence
aggtggcaccaccaggctgtggca[C/A]cccagtttacaagacgcaggcact
- ASB in cell types
- GM18486 (Lymphoblastoid Cell Lines) HMEC (human mammary epithelial cells)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN STAG2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -1.53 | 1.53 | 1.00 | -0.57 | Weak Discordant | |||
| STAG1_HUMAN | -1.86 | 1.94 | 1.00 | n/a | n/a | |||
| STAG2_HUMAN | -2.71 | 2.93 | 1.00 | n/a | n/a |
Items per page:
1 – 3 of 3
Motif analysis
