rs76466300 chr1:42913411 T>C
- Sequence
catatatatacacatatatacaca[T/C]acacacacacacacacacacacac
- ASB in cell types
- neural cell GM12890 (Lymphoblastoid Cell Lines) neural progenitors spleen
- ASB for transcription factors
- SMC3_HUMAN STAG1_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMC3_HUMAN | -3.85 | 3.90 | 1.00 | n/a | n/a | |||
| STAG1_HUMAN | -2.32 | 2.65 | 1.00 | n/a | n/a | |||
| CTCF_HUMAN | 1.52 | 0.04 | 1.20 | n/a | No Hit |
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