rs76475483 chr16:71441690 A>C

Sequence
tcgtggcttctccgcccaccgcgc[A/C]gggcgcagacttccggacgcaggg
ASB in cell types
GM19193 (female B-cells Lymphoblastoid Cell Lines)
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN -0.06 1.57 1.000.02 1.48 -0.26 Weak Discordant
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Motif analysis

CTCF_HUMAN Weak Discordant
CTCF_HUMAN pic

Genetic associations

GTEx eQTL Colon_Sigmoid Testis Whole_Blood

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