rs76489218 chr2:152717636 G>A
- Sequence
tcactcggcgtcgcctgcatgggg[G/A]ggggggaggaggaggacggaggaa
- ASB in cell types
- GM01310 ( Transformed lymphovlasoid cell line ) hTERT-HME1(Telomerase immortalized cell line) Th1-cells
- ASB for transcription factors
- AHR_HUMAN BRCA2_HUMAN TBX21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| AHR_HUMAN | -2.99 | 2.37 | 1.50 | n/a | No Hit | |||
| BRCA2_HUMAN | -3.06 | 3.12 | 1.00 | n/a | n/a | |||
| TBX21_HUMAN | -2.24 | 2.19 | 1.00 | n/a | No Hit |
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