rs76495162 chr7:24587961 T>G
- Sequence
aatacaccagtgattctctaaggg[T/G]gcagttttgccccctaagggacat
- ASB in cell types
- GM02255 (Lymphoblastoid Cell Lines) GM19239 (male B-cells lymphoblastoid cell line) GM18486 (Lymphoblastoid Cell Lines) EOL-1 (Acute myeloid leukemia)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.92 | 0.37 | 1.17 | n/a | No Hit | |||
| STAG1_HUMAN | 0.57 | -0.60 | 1.22 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Cells_Cultured_fibroblasts, Esophagus_Muscularis, Testis