rs76504716 chr4:76233804 T>G
- Sequence
gtgcccccaatatgtaaaaccaga[T/G]gaaggcttcatttcagaaccaaaa
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- NFIC_HUMAN HDAC2_HUMAN REQU_HUMAN SMCA4_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NFIC_HUMAN | 2.47 | n/a | 2.00 | n/a | No Hit | |||
| HDAC2_HUMAN | 3.12 | -5.64 | 2.00 | n/a | n/a | |||
| REQU_HUMAN | 2.74 | -5.07 | 2.00 | n/a | n/a | |||
| SMCA4_HUMAN | 2.51 | -4.74 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Lung, Nerve_Tibial, Pancreas, Pituitary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid